Coding sequence density estimation via topological pressure
نویسندگان
چکیده
منابع مشابه
Coding sequence density estimation via topological pressure.
We give a new approach to coding sequence (CDS) density estimation in genomic analysis based on the topological pressure, which we develop from a well known concept in ergodic theory. Topological pressure measures the 'weighted information content' of a finite word, and incorporates 64 parameters which can be interpreted as a choice of weight for each nucleotide triplet. We train the parameters...
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We give a new approach to coding sequence (CDS) density estimation in genomic analysis based on the topological pressure, which we develop from a well known concept in ergodic theory. Topological pressure measures the ‘weighted information content’ of a finite word, and incorporates 64 parameters which can be interpreted as a choice of weight for each nucleotide triplet. We train the parameters...
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ژورنال
عنوان ژورنال: Journal of Mathematical Biology
سال: 2014
ISSN: 0303-6812,1432-1416
DOI: 10.1007/s00285-014-0754-2